Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Gm11478-201ENSMUST00000117851 599 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Mir1894-201ENSMUST00000122802 81 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Gm6244-201ENSMUST00000178732 841 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.94□□□□□ -0.34
Trim33Q99PP7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.94□□□□□ -0.34
Trim33Q99PP7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.94□□□□□ -0.34
Trim33Q99PP7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim33Q99PP7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.93□□□□□ -0.34
Trim33Q99PP7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim33Q99PP7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.93□□□□□ -0.34
Trim33Q99PP7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.93□□□□□ -0.34
Trim33Q99PP7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.93□□□□□ -0.34
Trim33Q99PP7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms