Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Gm27989-201ENSMUST00000184721 107 ntBASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Gm12485-201ENSMUST00000119641 291 ntBASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Gm43094-201ENSMUST00000196549 921 ntBASIC12.75□□□□□ -0.37
Trim8Q99PJ2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim8Q99PJ2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms