Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gm3793-201ENSMUST00000204973 672 ntBASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Gm24749-201ENSMUST00000157838 343 ntBASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Gm3096-201ENSMUST00000185770 364 ntBASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Mir497b-201ENSMUST00000093601 125 ntBASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col25a1Q99MQ5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
Col25a1Q99MQ5 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.46□□□□□ -0.26
Col25a1Q99MQ5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col25a1Q99MQ5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Col25a1Q99MQ5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col25a1Q99MQ5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.44□□□□□ -0.26
Col25a1Q99MQ5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Col25a1Q99MQ5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col25a1Q99MQ5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col25a1Q99MQ5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col25a1Q99MQ5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col25a1Q99MQ5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms