Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.62□□□□□ -0.39
Rnf111Q99ML9 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.62□□□□□ -0.39
Rnf111Q99ML9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf111Q99ML9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Mir874-201ENSMUST00000104769 76 ntBASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Gm18307-201ENSMUST00000206864 949 ntBASIC12.61□□□□□ -0.39
Rnf111Q99ML9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.61□□□□□ -0.39
Rnf111Q99ML9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Gm11424-201ENSMUST00000121929 829 ntBASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms