Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gm45668-201ENSMUST00000211271 493 ntBASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp1b1Q99LU0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Gm11478-201ENSMUST00000117851 599 ntBASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Gm13689-201ENSMUST00000119360 685 ntBASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Gm11918-201ENSMUST00000121660 179 ntBASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp1b1Q99LU0 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms