Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Gm13461-201ENSMUST00000120980 662 ntBASIC13.66□□□□□ -0.22
Clp1Q99LI9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Gm20426-201ENSMUST00000173657 440 ntBASIC13.66□□□□□ -0.22
Clp1Q99LI9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.66□□□□□ -0.22
Clp1Q99LI9 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.66□□□□□ -0.22
Clp1Q99LI9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clp1Q99LI9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm27552-201ENSMUST00000183351 62 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm27844-201ENSMUST00000183613 62 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm19931-201ENSMUST00000198920 368 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm44100-201ENSMUST00000204329 436 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Gm45433-201ENSMUST00000209386 247 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 Thoc7-209ENSMUST00000225325 765 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.65□□□□□ -0.22
Clp1Q99LI9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clp1Q99LI9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Clp1Q99LI9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Clp1Q99LI9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.64□□□□□ -0.23
Clp1Q99LI9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms