Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.57□□□□□ -0.4
Vmp1Q99KU0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.57□□□□□ -0.4
Vmp1Q99KU0 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.57□□□□□ -0.4
Vmp1Q99KU0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.57□□□□□ -0.4
Vmp1Q99KU0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.56□□□□□ -0.4
Vmp1Q99KU0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gm15429-201ENSMUST00000151268 798 ntBASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gm38223-201ENSMUST00000194484 695 ntBASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gm17330-201ENSMUST00000221047 165 ntBASIC12.56□□□□□ -0.4
Vmp1Q99KU0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms