Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Gm9229-201ENSMUST00000222777 126 ntBASIC13.11□□□□□ -0.31
Cdk9Q99J95 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk9Q99J95 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.1□□□□□ -0.31
Cdk9Q99J95 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.1□□□□□ -0.31
Cdk9Q99J95 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.1□□□□□ -0.31
Cdk9Q99J95 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdk9Q99J95 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Gm5425-201ENSMUST00000214125 459 ntBASIC13.1□□□□□ -0.31
Cdk9Q99J95 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.1□□□□□ -0.31
Cdk9Q99J95 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.1□□□□□ -0.31
Cdk9Q99J95 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk9Q99J95 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.09□□□□□ -0.31
Cdk9Q99J95 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm10766-202ENSMUST00000194123 606 ntBASIC13.09□□□□□ -0.31
Cdk9Q99J95 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm45841-201ENSMUST00000207700 164 ntBASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.09□□□□□ -0.31
Cdk9Q99J95 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk9Q99J95 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk9Q99J95 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk9Q99J95 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk9Q99J95 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk9Q99J95 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cdk9Q99J95 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms