Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Gm44124-201ENSMUST00000204159 472 ntBASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thumpd1Q99J36 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.58□□□□□ -0.55
Thumpd1Q99J36 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Thumpd1Q99J36 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Thumpd1Q99J36 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Gm4995-201ENSMUST00000117247 432 ntBASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thumpd1Q99J36 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms