Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Mir339-201ENSMUST00000083659 96 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Gm20482-202ENSMUST00000174729 825 ntBASIC15.3■□□□□ 0.04
Col20a1Q923P0 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.3■□□□□ 0.04
Col20a1Q923P0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col20a1Q923P0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.3■□□□□ 0.04
Col20a1Q923P0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col20a1Q923P0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.29■□□□□ 0.04
Col20a1Q923P0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.29■□□□□ 0.04
Col20a1Q923P0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.29■□□□□ 0.04
Col20a1Q923P0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.29■□□□□ 0.04
Col20a1Q923P0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Daam2-202ENSMUST00000224595 1926 ntBASIC15.29■□□□□ 0.04
Col20a1Q923P0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Col20a1Q923P0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms