Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Clip1Q922J3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm8856-201ENSMUST00000185254 1144 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm9924-202ENSMUST00000192760 2311 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC20.21■□□□□ 0.83
Clip1Q922J3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Clip1Q922J3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm12217-201ENSMUST00000118858 696 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm14832-201ENSMUST00000121289 322 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 Gm26361-201ENSMUST00000158868 186 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 Mir3547-201ENSMUST00000175461 88 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC20.21■□□□□ 0.83
Clip1Q922J3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC20.21■□□□□ 0.83
Clip1Q922J3 Nsd1-205ENSMUST00000224693 852 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip1Q922J3 AC123665.1-201ENSMUST00000228204 438 ntBASIC20.21■□□□□ 0.83
Clip1Q922J3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Clip1Q922J3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Gm43138-201ENSMUST00000199123 708 ntBASIC20.2■□□□□ 0.82
Clip1Q922J3 Gm44262-201ENSMUST00000204969 372 ntBASIC20.2■□□□□ 0.82
Clip1Q922J3 Gm45224-201ENSMUST00000208203 414 ntBASIC20.2■□□□□ 0.82
Clip1Q922J3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Gm39404-201ENSMUST00000216350 313 ntBASIC20.2■□□□□ 0.82
Clip1Q922J3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Clip1Q922J3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip1Q922J3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC20.2■□□□□ 0.82
Clip1Q922J3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Clip1Q922J3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Clip1Q922J3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clip1Q922J3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC20.19■□□□□ 0.82
Clip1Q922J3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip1Q922J3 Gm14277-201ENSMUST00000121195 360 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms