Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm8463-201ENSMUST00000208573 613 ntBASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha8Q91Y12 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gm11918-201ENSMUST00000121660 179 ntBASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gm9908-201ENSMUST00000211534 448 ntBASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha8Q91Y12 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Gm45384-201ENSMUST00000210451 277 ntBASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha8Q91Y12 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms