Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdha9Q91Y11 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha9Q91Y11 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gm13813-201ENSMUST00000120998 787 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gm27731-201ENSMUST00000185192 107 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gm45784-201ENSMUST00000188360 142 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gm8099-201ENSMUST00000200510 742 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdha9Q91Y11 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms