Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gm8810-201ENSMUST00000172895 754 ntBASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Gm11814-201ENSMUST00000119515 929 ntBASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb1Q91Y08 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Gm14127-201ENSMUST00000117906 678 ntBASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Gm12291-201ENSMUST00000121627 311 ntBASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Gm24196-201ENSMUST00000179161 110 ntBASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Gm7653-201ENSMUST00000214567 508 ntBASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms