Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm13689-201ENSMUST00000119360 685 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm13438-201ENSMUST00000120100 573 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Cfhr3-201ENSMUST00000170441 1022 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm19086-201ENSMUST00000190772 665 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm44397-201ENSMUST00000195950 113 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 AC131117.1-201ENSMUST00000225154 1171 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 AC123735.1-201ENSMUST00000227358 605 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 CT025523.1-201ENSMUST00000228318 694 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Gm15071-201ENSMUST00000118189 1366 ntBASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb20Q91XZ9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gm38144-201ENSMUST00000192790 465 ntBASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gm9023-201ENSMUST00000198408 1038 ntBASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 AC153646.1-201ENSMUST00000223229 1279 ntBASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Olfr452-201ENSMUST00000075468 954 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gm5356-201ENSMUST00000093326 615 ntBASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb20Q91XZ9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms