Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Gm37744-201ENSMUST00000194616 1590 ntBASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb22Q91XZ8 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb22Q91XZ8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Gm14921-201ENSMUST00000118643 908 ntBASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Gm13813-201ENSMUST00000120998 787 ntBASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Thoc7-209ENSMUST00000225325 765 ntBASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb22Q91XZ8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gm11425-201ENSMUST00000119608 498 ntBASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms