Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gm18473-201ENSMUST00000220543 868 ntBASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb8Q91XZ2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Gm12928-201ENSMUST00000117115 573 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Gm16202-201ENSMUST00000117532 544 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Gm27701-201ENSMUST00000184498 110 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb8Q91XZ2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb8Q91XZ2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Gm11978-201ENSMUST00000122315 466 ntBASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Gm12091-201ENSMUST00000146791 830 ntBASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Gm28911-201ENSMUST00000188837 117 ntBASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.7□□□□□ -0.38
Pcdhb8Q91XZ2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms