Protein–RNA interactions for Protein: Q91XY7

Pcdhga12, Protocadherin gamma A12, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga12Q91XY7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga12Q91XY7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga12Q91XY7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga12Q91XY7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.43□□□□□ -0.42
Pcdhga12Q91XY7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga12Q91XY7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga12Q91XY7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga12Q91XY7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga12Q91XY7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.4□□□□□ -0.42
Pcdhga12Q91XY7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms