Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.85□□□□□ -0.35
Vsx1Q91V10 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Gm9083-201ENSMUST00000120423 819 ntBASIC12.85□□□□□ -0.35
Vsx1Q91V10 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.85□□□□□ -0.35
Vsx1Q91V10 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.85□□□□□ -0.35
Vsx1Q91V10 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Gm28450-201ENSMUST00000187349 638 ntBASIC12.85□□□□□ -0.35
Vsx1Q91V10 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vsx1Q91V10 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm25214-201ENSMUST00000104573 129 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm11531-201ENSMUST00000117614 555 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm7593-201ENSMUST00000187246 644 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm44100-201ENSMUST00000204329 436 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.84□□□□□ -0.35
Vsx1Q91V10 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vsx1Q91V10 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.83□□□□□ -0.35
Vsx1Q91V10 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.83□□□□□ -0.35
Vsx1Q91V10 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.83□□□□□ -0.36
Vsx1Q91V10 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms