Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H1fooQ8VIK3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
H1fooQ8VIK3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H1fooQ8VIK3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H1fooQ8VIK3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H1fooQ8VIK3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H1fooQ8VIK3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H1fooQ8VIK3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Gm44487-201ENSMUST00000205145 325 ntBASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.89□□□□□ -0.67
H1fooQ8VIK3 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms