Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm23958-201ENSMUST00000157207 105 ntBASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm5425-201ENSMUST00000214125 459 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm8396-201ENSMUST00000057361 823 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.11□□□□□ -0.31
Rpa1Q8VEE4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms