Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Gm6211-201ENSMUST00000147973 4275 ntBASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Gm9727-201ENSMUST00000161387 555 ntBASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Gm38055-201ENSMUST00000195353 2217 ntBASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Gm5364-201ENSMUST00000216789 889 ntBASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc9Q8VC31 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc9Q8VC31 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc9Q8VC31 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc9Q8VC31 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms