Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm12485-201ENSMUST00000119641 291 ntBASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Gm27680-201ENSMUST00000184192 160 ntBASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Gm27525-201ENSMUST00000184465 107 ntBASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nup35Q8R4R6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Gm5312-201ENSMUST00000203728 547 ntBASIC10.59□□□□□ -0.71
Nup35Q8R4R6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.59□□□□□ -0.71
Nup35Q8R4R6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Nup35Q8R4R6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.71
Nup35Q8R4R6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Nup35Q8R4R6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms