Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC18.26■□□□□ 0.51
Cd109Q8R422 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Gm28450-201ENSMUST00000187349 638 ntBASIC18.26■□□□□ 0.51
Cd109Q8R422 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Gm44651-201ENSMUST00000207343 372 ntBASIC18.26■□□□□ 0.51
Cd109Q8R422 Gm10312-201ENSMUST00000078515 489 ntBASIC18.26■□□□□ 0.51
Cd109Q8R422 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Cd109Q8R422 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC18.26■□□□□ 0.51
Cd109Q8R422 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cd109Q8R422 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cd109Q8R422 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd109Q8R422 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Cd109Q8R422 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC18.25■□□□□ 0.51
Cd109Q8R422 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cd109Q8R422 AC166344.1-202ENSMUST00000224139 234 ntBASIC18.25■□□□□ 0.51
Cd109Q8R422 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cd109Q8R422 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC18.25■□□□□ 0.51
Cd109Q8R422 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC18.25■□□□□ 0.51
Cd109Q8R422 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.25■□□□□ 0.51
Cd109Q8R422 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC18.25■□□□□ 0.51
Cd109Q8R422 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cd109Q8R422 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd109Q8R422 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm13296-201ENSMUST00000117854 997 ntBASIC18.24■□□□□ 0.51
Cd109Q8R422 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm28882-201ENSMUST00000185504 314 ntBASIC18.24■□□□□ 0.51
Cd109Q8R422 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm30238-201ENSMUST00000195528 2603 ntBASIC18.24■□□□□ 0.51
Cd109Q8R422 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 AC122197.2-201ENSMUST00000219196 1635 ntBASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm44891-201ENSMUST00000208817 2223 ntBASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd109Q8R422 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm9333-201ENSMUST00000205452 1323 ntBASIC18.24■□□□□ 0.51
Cd109Q8R422 Gm12176-201ENSMUST00000121420 875 ntBASIC18.23■□□□□ 0.51
Cd109Q8R422 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC18.23■□□□□ 0.51
Cd109Q8R422 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC18.23■□□□□ 0.51
Cd109Q8R422 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cd109Q8R422 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Cd109Q8R422 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cd109Q8R422 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.23■□□□□ 0.51
Cd109Q8R422 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Cd109Q8R422 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd109Q8R422 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms