Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gm14719-201ENSMUST00000121891 340 ntBASIC12.09□□□□□ -0.47
H2afjQ8R1M2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gm28760-201ENSMUST00000185995 736 ntBASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gm38144-201ENSMUST00000192790 465 ntBASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gm43094-201ENSMUST00000196549 921 ntBASIC12.09□□□□□ -0.47
H2afjQ8R1M2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gm24447-201ENSMUST00000083977 338 ntBASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afjQ8R1M2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
H2afjQ8R1M2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
H2afjQ8R1M2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afjQ8R1M2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afjQ8R1M2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afjQ8R1M2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afjQ8R1M2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Gm24694-201ENSMUST00000180054 110 ntBASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Gm27663-201ENSMUST00000184839 110 ntBASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.08□□□□□ -0.48
H2afjQ8R1M2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afjQ8R1M2 Paupar-201ENSMUST00000194826 3482 ntBASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Gm15678-201ENSMUST00000117573 960 ntBASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afjQ8R1M2 Gm11524-201ENSMUST00000119349 807 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms