Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Gm11594-201ENSMUST00000122313 162 ntBASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf4Q8K4J2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Gm8000-201ENSMUST00000188378 592 ntBASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.81□□□□□ -0.52
Ebf4Q8K4J2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms