Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Gm14109-201ENSMUST00000118814 309 ntBASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Gm14704-201ENSMUST00000120300 874 ntBASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Gm15547-201ENSMUST00000122152 333 ntBASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Gm26361-201ENSMUST00000158868 186 ntBASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shtn1Q8K2Q9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Gm7003-201ENSMUST00000195089 312 ntBASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Daam2-202ENSMUST00000224595 1926 ntBASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shtn1Q8K2Q9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Gm22058-201ENSMUST00000083393 310 ntBASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shtn1Q8K2Q9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms