Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.59□□□□□ -0.55
ShfQ8CG80 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.59□□□□□ -0.55
ShfQ8CG80 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.59□□□□□ -0.55
ShfQ8CG80 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm44069-201ENSMUST00000204898 506 ntBASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.59□□□□□ -0.55
ShfQ8CG80 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.59□□□□□ -0.55
ShfQ8CG80 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ShfQ8CG80 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.59□□□□□ -0.55
ShfQ8CG80 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
ShfQ8CG80 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
ShfQ8CG80 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
ShfQ8CG80 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
ShfQ8CG80 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.58□□□□□ -0.56
ShfQ8CG80 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gm16202-201ENSMUST00000117532 544 ntBASIC11.58□□□□□ -0.56
ShfQ8CG80 Gm13813-201ENSMUST00000120998 787 ntBASIC11.58□□□□□ -0.56
ShfQ8CG80 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.58□□□□□ -0.56
ShfQ8CG80 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.58□□□□□ -0.56
ShfQ8CG80 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ShfQ8CG80 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ShfQ8CG80 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.57□□□□□ -0.56
ShfQ8CG80 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.57□□□□□ -0.56
ShfQ8CG80 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Gm12341-201ENSMUST00000119724 503 ntBASIC11.57□□□□□ -0.56
ShfQ8CG80 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ShfQ8CG80 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.57□□□□□ -0.56
ShfQ8CG80 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms