Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nup88Q8CEC0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup88Q8CEC0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup88Q8CEC0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Mir6420-201ENSMUST00000185032 102 ntBASIC15.34■□□□□ 0.05
Nup88Q8CEC0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup88Q8CEC0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nup88Q8CEC0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.33■□□□□ 0.05
Nup88Q8CEC0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Gm8062-201ENSMUST00000139696 444 ntBASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Mir7221-201ENSMUST00000184009 72 ntBASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Gm45331-201ENSMUST00000209868 554 ntBASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Gm10478-201ENSMUST00000084451 396 ntBASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nup88Q8CEC0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Gm24644-201ENSMUST00000157114 139 ntBASIC15.32■□□□□ 0.04
Nup88Q8CEC0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Gm42693-201ENSMUST00000196779 631 ntBASIC15.32■□□□□ 0.04
Nup88Q8CEC0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nup88Q8CEC0 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gm17420-201ENSMUST00000164753 153 ntBASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms