Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Gm37922-201ENSMUST00000195596 455 ntBASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Gm42627-201ENSMUST00000197347 224 ntBASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Gm43118-201ENSMUST00000199149 775 ntBASIC15.29■□□□□ 0.04
E4f1Q8CCE9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
E4f1Q8CCE9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm7584-201ENSMUST00000175829 940 ntBASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm26927-201ENSMUST00000182385 965 ntBASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm38241-201ENSMUST00000192641 898 ntBASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E4f1Q8CCE9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Gm13350-201ENSMUST00000120519 479 ntBASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Gm24526-201ENSMUST00000082921 158 ntBASIC15.27■□□□□ 0.04
E4f1Q8CCE9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.27■□□□□ 0.03
E4f1Q8CCE9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms