Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gm43094-201ENSMUST00000196549 921 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gm7775-201ENSMUST00000218871 853 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Gm15376-201ENSMUST00000122258 783 ntBASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Gm6888-201ENSMUST00000221983 706 ntBASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lysmd4Q8CC84 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Lysmd4Q8CC84 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lysmd4Q8CC84 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lysmd4Q8CC84 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lysmd4Q8CC84 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Lysmd4Q8CC84 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms