Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Mir7023-201ENSMUST00000185093 64 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Gm10576-201ENSMUST00000191927 825 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Gm29741-201ENSMUST00000192667 421 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Gm16476-201ENSMUST00000221544 139 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Dupd1-202ENSMUST00000224735 548 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tsen54Q8C2A2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tsen54Q8C2A2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tsen54Q8C2A2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tsen54Q8C2A2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tsen54Q8C2A2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tsen54Q8C2A2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gm15678-201ENSMUST00000117573 960 ntBASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Auts2-212ENSMUST00000178555 309 ntBASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Shd-206ENSMUST00000225145 998 ntBASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Mir125a-201ENSMUST00000083545 68 ntBASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 BC001981-202ENSMUST00000191393 1545 ntBASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tsen54Q8C2A2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms