Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trub1Q8C0D0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trub1Q8C0D0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trub1Q8C0D0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trub1Q8C0D0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trub1Q8C0D0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gm12203-201ENSMUST00000118235 598 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gm11814-201ENSMUST00000119515 929 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gm12209-201ENSMUST00000120089 596 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trub1Q8C0D0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms