Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Mterf4-201ENSMUST00000027492 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm22543-201ENSMUST00000104347 94 ntBASIC14.31□□□□□ -0.12
Trim35Q8C006 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.31□□□□□ -0.12
Trim35Q8C006 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm15483-201ENSMUST00000120338 456 ntBASIC14.31□□□□□ -0.12
Trim35Q8C006 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm8513-201ENSMUST00000182830 1003 ntBASIC14.31□□□□□ -0.12
Trim35Q8C006 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm43344-201ENSMUST00000198723 1229 ntBASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm44872-201ENSMUST00000207864 420 ntBASIC14.31□□□□□ -0.12
Trim35Q8C006 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim35Q8C006 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim35Q8C006 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim35Q8C006 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Mir449b-201ENSMUST00000104833 80 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Mir669d-2-201ENSMUST00000116854 86 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm13616-201ENSMUST00000120600 222 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm37708-201ENSMUST00000192337 895 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm18492-201ENSMUST00000198141 1018 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm4860-201ENSMUST00000200368 454 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm42850-201ENSMUST00000202094 201 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 AC153143.1-201ENSMUST00000222966 1340 ntBASIC14.3□□□□□ -0.12
Trim35Q8C006 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Gm14797-201ENSMUST00000119378 1480 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms