Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm24255-201ENSMUST00000104481 128 ntBASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gm26083-201ENSMUST00000157904 193 ntBASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gm27320-201ENSMUST00000184892 109 ntBASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gm4857-201ENSMUST00000192718 785 ntBASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf2Q8BZT2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sh3rf2Q8BZT2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms