Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.77□□□□□ -0.2
Trerf1Q8BXJ2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trerf1Q8BXJ2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Gm28911-201ENSMUST00000188837 117 ntBASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trerf1Q8BXJ2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms