Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Gm22331-201ENSMUST00000158066 136 ntBASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Gm7561-201ENSMUST00000211203 886 ntBASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm12291-201ENSMUST00000121627 311 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm27331-201ENSMUST00000183705 60 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm27847-201ENSMUST00000183711 107 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm27375-201ENSMUST00000183799 107 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm27839-201ENSMUST00000184242 106 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Usp43Q8BUM9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Usp43Q8BUM9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Usp43Q8BUM9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.15□□□□□ -0.31
Usp43Q8BUM9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm11637-201ENSMUST00000120601 592 ntBASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm16479-201ENSMUST00000121706 932 ntBASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm2231-201ENSMUST00000125661 612 ntBASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm24644-201ENSMUST00000157114 139 ntBASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp43Q8BUM9 Gm29705-201ENSMUST00000212598 474 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms