Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm7809-201ENSMUST00000153199 742 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm27501-201ENSMUST00000183599 107 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm38266-201ENSMUST00000194931 421 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm18584-201ENSMUST00000203098 964 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Grk6-205ENSMUST00000224653 2976 ntBASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm3890-201ENSMUST00000182416 207 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm5781-201ENSMUST00000219792 443 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap1Q8BTW8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.34□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms