Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Gm42550-201ENSMUST00000201553 960 ntBASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Gm5356-201ENSMUST00000093326 615 ntBASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4Q8BQZ5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Gm44397-201ENSMUST00000195950 113 ntBASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Gm45841-201ENSMUST00000207700 164 ntBASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4Q8BQZ5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms