Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gm45841-201ENSMUST00000207700 164 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gm16372-201ENSMUST00000073088 450 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gm25857-201ENSMUST00000082788 129 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.29□□□□□ -0.6
Srrm4Q8BKA3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Gm14127-201ENSMUST00000117906 678 ntBASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Gm44069-201ENSMUST00000204898 506 ntBASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srrm4Q8BKA3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Srrm4Q8BKA3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 Gm29127-201ENSMUST00000188304 517 ntBASIC11.27□□□□□ -0.61
Srrm4Q8BKA3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms