Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Gm12742-201ENSMUST00000117326 410 ntBASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Gm13226-201ENSMUST00000117838 404 ntBASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Gm8652-201ENSMUST00000181363 964 ntBASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Gm27847-201ENSMUST00000183711 107 ntBASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Gm27375-201ENSMUST00000183799 107 ntBASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Depdc1bQ8BH88 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Depdc1bQ8BH88 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Depdc1bQ8BH88 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Gm45784-201ENSMUST00000188360 142 ntBASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Gm38671-201ENSMUST00000200573 130 ntBASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Depdc1bQ8BH88 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gm13612-201ENSMUST00000119276 390 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gm7561-201ENSMUST00000211203 886 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Depdc1bQ8BH88 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms