Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm23931-201ENSMUST00000103842 109 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 AY702102-202ENSMUST00000194651 1173 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.1□□□□□ -0.47
Atg4dQ8BGV9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm25261-201ENSMUST00000157416 134 ntBASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4dQ8BGV9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.47
Atg4dQ8BGV9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Atg4dQ8BGV9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms