Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm11618-201ENSMUST00000117946 267 ntBASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm8810-201ENSMUST00000172895 754 ntBASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm24196-201ENSMUST00000179161 110 ntBASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm8652-201ENSMUST00000181363 964 ntBASIC12.67□□□□□ -0.38
Trim50Q810I2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm5186-201ENSMUST00000218781 920 ntBASIC12.67□□□□□ -0.38
Trim50Q810I2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.67□□□□□ -0.38
Trim50Q810I2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.67□□□□□ -0.38
Trim50Q810I2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim50Q810I2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim50Q810I2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.66□□□□□ -0.38
Trim50Q810I2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.66□□□□□ -0.38
Trim50Q810I2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm11814-201ENSMUST00000119515 929 ntBASIC12.66□□□□□ -0.38
Trim50Q810I2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.66□□□□□ -0.38
Trim50Q810I2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.66□□□□□ -0.38
Trim50Q810I2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim50Q810I2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim50Q810I2 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.65□□□□□ -0.38
Trim50Q810I2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim50Q810I2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.65□□□□□ -0.38
Trim50Q810I2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms