Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm13385-201ENSMUST00000121089 220 ntBASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 B9d1os-201ENSMUST00000137010 674 ntBASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm24990-201ENSMUST00000157406 323 ntBASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm10608-202ENSMUST00000213924 676 ntBASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Paupar-201ENSMUST00000194826 3482 ntBASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm12566-201ENSMUST00000121479 359 ntBASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm37489-201ENSMUST00000191883 159 ntBASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gm18212-201ENSMUST00000211678 889 ntBASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf38bQ80SY5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
Prpf38bQ80SY5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm15370-201ENSMUST00000117158 253 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm5687-201ENSMUST00000118252 640 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms