Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Pcdh8Q7TSK3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh8Q7TSK3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh8Q7TSK3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh8Q7TSK3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm16479-201ENSMUST00000121706 932 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm27501-201ENSMUST00000183599 107 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm27516-201ENSMUST00000184237 98 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm6458-201ENSMUST00000211573 635 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh8Q7TSK3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm14723-201ENSMUST00000118686 215 ntBASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm43822-201ENSMUST00000200285 476 ntBASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh8Q7TSK3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms