Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Gm38241-201ENSMUST00000192641 898 ntBASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Gm7783-201ENSMUST00000204795 781 ntBASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc88cQ6VGS5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc88cQ6VGS5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc88cQ6VGS5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc88cQ6VGS5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc88cQ6VGS5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc88cQ6VGS5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Gm13736-201ENSMUST00000119272 253 ntBASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Gm37201-201ENSMUST00000191845 523 ntBASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc88cQ6VGS5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms