Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gm11591-201ENSMUST00000120063 702 ntBASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gm27501-201ENSMUST00000183599 107 ntBASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Nudcd1Q6PIP5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Mir7221-201ENSMUST00000184009 72 ntBASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Gm37042-201ENSMUST00000193816 581 ntBASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Gm3961-201ENSMUST00000204425 994 ntBASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd1Q6PIP5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm13786-201ENSMUST00000122371 333 ntBASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms