Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.83□□□□□ -0.36
Scaf4Q6PFF0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scaf4Q6PFF0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.83□□□□□ -0.36
Scaf4Q6PFF0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Scaf4Q6PFF0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.83□□□□□ -0.36
Scaf4Q6PFF0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scaf4Q6PFF0 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Gm13223-201ENSMUST00000118609 747 ntBASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scaf4Q6PFF0 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm11524-201ENSMUST00000119349 807 ntBASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm44124-201ENSMUST00000204159 472 ntBASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scaf4Q6PFF0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Rubie-203ENSMUST00000227803 2430 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Gm9522-201ENSMUST00000182394 926 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Gm2756-201ENSMUST00000195851 400 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Gm5279-201ENSMUST00000199575 745 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms