Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm13385-201ENSMUST00000121089 220 ntBASIC13.83□□□□□ -0.2
CtifQ6PEE2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm8227-201ENSMUST00000223306 571 ntBASIC13.83□□□□□ -0.2
CtifQ6PEE2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.83□□□□□ -0.2
CtifQ6PEE2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.83□□□□□ -0.2
CtifQ6PEE2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.83□□□□□ -0.2
CtifQ6PEE2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CtifQ6PEE2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.82□□□□□ -0.2
CtifQ6PEE2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gm17968-201ENSMUST00000194902 784 ntBASIC13.82□□□□□ -0.2
CtifQ6PEE2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.82□□□□□ -0.2
CtifQ6PEE2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.82□□□□□ -0.2
CtifQ6PEE2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CtifQ6PEE2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm4995-201ENSMUST00000117247 432 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm14140-201ENSMUST00000119999 995 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.81□□□□□ -0.2
CtifQ6PEE2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CtifQ6PEE2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms