Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm44100-201ENSMUST00000204329 436 ntBASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm18730-201ENSMUST00000218038 343 ntBASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Chd4Q6PDQ2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm29615-201ENSMUST00000185371 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm28224-201ENSMUST00000186078 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm29001-201ENSMUST00000186177 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm28292-201ENSMUST00000186593 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm28101-201ENSMUST00000187608 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm29076-201ENSMUST00000187689 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm28302-201ENSMUST00000187931 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm28646-201ENSMUST00000188220 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm28205-201ENSMUST00000189177 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm29032-201ENSMUST00000189797 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm28695-201ENSMUST00000190300 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm37448-201ENSMUST00000192795 697 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.63■□□□□ 0.25
Chd4Q6PDQ2 Gm14263-201ENSMUST00000117955 746 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Gm19353-201ENSMUST00000184561 445 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Gm9230-201ENSMUST00000188228 532 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Gm44126-201ENSMUST00000204831 514 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Ntng1-201ENSMUST00000051253 327 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms